SIF is a simple interaction format consisting of three columns of data: source, interaction and target. To learn more about the SIF format, see the Cytoscape manual. Download galFiltered.sif. This ...

Check out the current list of training materials. Building upon the powerful framework of reveal.js, we have developed a few custom features and styles tailored for use in Cytoscape training materials ...

High-throughput technologies allow enormous amounts of data to be collected on biological networks, including protein-protein interactions, protein-DNA interactions, kinase-substrate interactions, ...

In this paper we present the open-source WikiPathways app for Cytoscape ( http://apps.cytoscape.org/apps/wikipathways) that can be used to import biological pathways ...