1. Save the script to a file, for example, enzyme_cut_sites.py. 2. Ensure that Python is installed on your system (Python 3 is recommended). 3. Run the script from the terminal using the following ...
This repo (and PyPI package) contains a Python function that performs a balanced cut-tree of a SciPy linkage matrix built using any linkage method (e.g. 'ward'). It builds upon the SciPy and NumPy ...