When I ask first-year computer science undergraduate students how to quantify the speed of an algorithm, they look at me puzzled and tell me to just run the algorithm and see how long it takes. Such ...

When scientists first began to clone and sequence genes, the process was laborious and entirely manual. The arrival of automated protein sequencing machines in the early 1980s (Ref. 1) was an event ...

Scalable Graph Algorithms for Bioinformatics using Structure, Parameterization and Dynamic Updates, ERC Consolidator Grant, 9/2025-8/2030 Sequencing technologies have developed to be cheap and ...

Our research is focused on graph algorithms, from both a theoretical perspective, and a practical perspective motivated by real-world problems in Bioinformatics, such as genome sequencing technologies ...

Run an initial check to be sure the template was installed correctly, install the included Python package as an executable (allows for use of CLI), install required external packages, and make sure ...

Bioinformatics, at the intersection of biology and computational science, has transformed genetic diagnostics by enabling comprehensive analysis and interpretation of complex biological data. As ...

Bioinformatics Algorithms: an Active Learning Approach is one of the first textbooks to emerge from the recent Massive Open Online Course (MOOC) revolution. A light-hearted and analogy-filled ...

This is based on Python and Jupyter Notebook. You can use any programming language you want but Python is a very popular choice. More info available on my blog. This ...